Platform Overview
What would you like to do?
Explore a target, review mechanism-specific candidates, and keep the supporting evidence in view. Start with a gene below, or use an existing sequence. Support and evidence vary by mechanism; computational outputs require experimental validation.
41
Therapeutic Mechanisms
9
Therapeutic Goals
11
Computational Modules
AddIncrease or restore useful RNA or protein.
Explore options
RemoveReduce harmful RNA or its activity.
Explore options
ModifyChange or correct RNA and molecular function.
Explore options
1. Choose your target
Search by Disease
Don't know the gene yet? Search by disease name — associations are human-based (Open Targets) and run directly on your selected organism.
Upload Sequence
ActionImport custom ASO, siRNA, or RNA sequences for analysis and design.
Direct Designers
Power userSkip the guided flow — go straight to any mechanism designer (A21–A41).
Differential Splicing
DiscoveryDiscover disease-associated splicing events from RNA-seq and design splice-switching oligonucleotides.
Analysis Modules
- 01Biological Information Retrieval
- 02Therapeutic Mechanism Configuration
- 03Molecular Defect Identification
- 04Therapeutic Goal Prediction
- 05Rulebook Execution
- 06Mechanism-specific Target Discovery
- 07Candidate Design
- 08Candidate Optimization
- 09Candidate Ranking
- 10Computational Evidence Review
- 11Final Report Generation
Therapeutic Mechanisms
Gene Silencing (8)
- A1: RNase H-mediated Gapmer Knockdown
- A2: Steric-Blocking Translation Inhibition
- A12: microRNA Inhibition (Anti-miR / AntagomiR)
- A15: Promoter-Targeted RNA Silencing (Experimental; design unavailable)
- A21: RNA Interference (siRNA)
- A22: External Guide Sequence (EGS) — RNase P Recruitment
- A40: Target-Directed miRNA Degradation (TDMD) Trigger
- A41: U1 Adaptor — snRNP-Tethered Nuclear mRNA Degradation
Gene Upregulation (6)
- A3: Poison Exon Blocking (TANGO)
- A4: AntagoNAT (NAT Knockdown)
- A5: uORF Blocking
- A6: miRNA Binding Site Blocking
- A23: saRNA-mediated Transcriptional Activation
- A28: Translation Repressor Site Blocking (RBP Masking)
RNA Editing / Correction (6)
- A13: ADAR-Mediated Site-Directed RNA Editing (SDRE)
- A16: C-to-U Editing (APOBEC / RESCUE)
- A17: LEAPER — Endogenous ADAR Recruitment
- A18: CIRTS — Programmable RNA Effector Recruitment
- A19: REPAIR — Cas13b–ADAR2 A-to-I Editing
- A20: SMaRT Trans-Splicing
RNA Processing Modulation (5)
- A7: Exon Skipping
- A8: Exon Inclusion (Splice Correction)
- A9: Pseudoexon Suppression
- A10: Cryptic Splice-site Blocking
- A11: Alternative Polyadenylation (APA) Modulation
RNA Neutralization (1)
- A14: Toxic RNA Neutralization (RNA Foci Disruption)
Translational Regulation (4)
- A27: Riboswitch / RNA Structure Targeting
- A29: IRES-Targeted Translation Modulation
- A30: Kozak Sequence Modulation
- A31: Poly(A) Tail / PABP Competition
Isoform Engineering (2)
- A32: Alternative Promoter Switch
- A33: Targeted Intron Retention
Protein Replacement (5)
- A24: Messenger RNA (mRNA) Replacement Therapy
- A26: Circular RNA (circRNA)-Mediated Protein Replacement
- A34: Trans-splicing ASO-Mediated Exon Replacement
- A35: Readthrough-Inducing ASO
- A36: Engineered Suppressor tRNA
Protein Function Modulation (4)
- A25: RNA Aptamer Therapeutics
- A37: Allosteric RNA Aptamer
- A38: Aptamer-Drug Conjugate (ApDC)
- A39: Bifunctional RNA Aptamer